Install CellRegMap

Stable version

cellregmap can be installed from PyPI with pip:

python3 -m pip install cellregmap

Development version

To install cellregmap in development mode, install it from the GitHub repository:

git clone https://github.com/limix/CellRegMap.git
cd CellRegMap
python3 -m pip install -e

Docker installation

If you use Docker, you can also pull the pre-build image from dockerhub